Crop Improvement Lab Contact

Our Publications

Scientific contributions on Xoo–rice molecular interaction, forward genetics, the rice seed microbiome, and abiotic stress adaptation.

2026

Converging QTL mapping with MutMap identifies novel genomic regions associated with strong culm in rice (Oryza sativa L.)

Planta
Read More →
2026

Transcriptome analysis reveals key players in plant immunity triggered by diffusible signal factor (DSF), a Xanthomonas-secreted quorum-sensing molecule

Molecular Plant-Microbe Interactions
Read More →
2025

A novel allele of Mitogen Activated Protein Kinase 6 is linked to disease resistance and constitutive immunity in rice

bioRxiv preprint
Read More →
2024

Xanthomonas protegens sp. nov., a novel rice seed-associated bacterium, provides in vivo protection against X. oryzae pv. oryzae

FEMS Microbiology Letters
Read More →
2024

Luteibacter sahnii sp. nov., a novel yellow-colored xanthomonadin pigment producing probiotic bacterium from healthy rice seed microbiome

Current Microbiology
Read More →
2024

Strong culm: a crucial trait for developing next-generation climate-resilient rice lines

Physiology and Molecular Biology of Plants
Read More →
2024

Comparative genomics-based insights into Xanthomonas indica, a non-pathogenic species of healthy rice microbiome with bioprotection function

Applied and Environmental Microbiology
Read More →
2024

Multiomics-assisted characterization of rice-Yellow Stem Borer interaction provides genomic and mechanistic insights into stem borer resistance in rice

Theoretical and Applied Genetics
Read More →
2024

Impairment in a member of AP2/ERF and F-box family protein enhances complete panicle exsertion, an economically important trait in rice

Journal of Experimental Botany
Read More →
2023

Transcriptome sequencing of the recretohalophyte Aeluropus lagopoides revealed molecular insight of salt stress adaptation

Journal of Plant Growth Regulation
Read More →
2023

Mutational analysis of predicted active site residues of an exoglucanase secreted by Xanthomonas oryzae pv. oryzae to determine their role in catalysis and in virulence on rice

Enzyme and Microbial Technology
Read More →
2023

Combined strategy employing MutMap and RNA-seq reveals genomic regions and genes associated with complete panicle exsertion in rice

Molecular Breeding
Read More →
2023

Fine mapping and sequence analysis reveal a promising candidate gene encoding a novel NB-ARC domain derived from wild rice (Oryza officinalis) that confers bacterial blight resistance

Frontiers in Plant Science
Read More →
2022

Xanthomonas indica sp. nov., a novel member of non-pathogenic Xanthomonas community from healthy rice seeds

Current Microbiology
Read More →
2022

DRR Dhan 58, a seedling stage salinity tolerant NIL of Improved Samba Mahsuri shows superior performance in multi-location trials

Rice (N Y)
Read More →
2022

Suppression of XopQ-XopX induced immune responses of rice by the type III effector XopG

Molecular Plant Pathology
Read More →
2022

Role of FnIII domain associated with a cell wall degrading enzyme CellobiosidaseA of Xanthomonas oryzae pv. oryzae

Molecular Plant Pathology
Read More →
2021

Arms and ammunitions: effectors at the interface of rice and its pathogens and pests

Rice (N Y)
Read More →
2021

Mutation resource of Samba Mahsuri revealed the presence of high extent of variations among key traits for rice improvement

PLOS One
Read More →
2021

Xanthomonas oryzae pv. oryzae exoribonuclease R is required for complete virulence in rice, optimal motility, and growth under stress

Phytopathology
Read More →
2020

Dual activities of receptor like kinase OsWAKL21.2 induce immune responses

Plant Physiology
Read More →
2020

Interaction of the Xanthomonas effectors XopQ and XopX results in induction of rice immune responses

The Plant Journal
Read More →
2020

Repeated gain and loss of a single gene modulates the evolution of vascular plant pathogen lifestyles

Science Advances
Read More →
2019

Overexpression of OsPUB41, a rice E3 ubiquitin ligase induced by cell wall degrading enzymes, enhances immune responses in rice and Arabidopsis

BMC Plant Biology
Read More →
2018

Incorporation of the novel bacterial blight resistance gene Xa38 into the genetic background of elite rice variety Improved Samba Mahsuri

PLOS One
Read More →
2018

Overexpression of a cell wall damage induced transcription factor, OsWRKY42, leads to enhanced callose deposition and tolerance to salt stress but does not enhance tolerance to bacterial infection

BMC Plant Biology
Read More →
2016

Action of multiple cell wall degrading enzymes is required for elicitation of innate immune responses during Xanthomonas oryzae pv. oryzae infection in rice

Molecular Plant-Microbe Interactions
Read More →